FRISHMAN, DMITRIJ: search on Z-Library

Fundraising September 15, 2024 – October 1, 2024 About fundraising

The world's largest scientific articles store. 70,000,000+ articles for free.

Fundraising September 15, 2024 – October 1, 2024

Z-Library is one of the largest online libraries in the world that contains over 17,000,000 books and 84,837,000 articles. We aim to make literature accessible to everyone. Today (September 15, 2024) we've started additional fundraising to project maintenance and development.

Also UNLIMITED downloads (for 31 days after the day of making donation) are available for ALL contributors who will donate during the fundraising period till October 1, 2024.

About fundraisingRead more

Make a donation

1

Knowledge-based protein secondary structure assignment

Dmitrij Frishman, Patrick Argos

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1995

Language:

english

File:

PDF, 1.32 MB

english, 1995

2

Identification of novel hereditary cancer genes by whole exome sequencing

Sokolenko, Anna P., Suspitsin, Evgeny N., Kuligina, Ekatherina Sh, Bizin, Ilya V., Frishman, Dmitrij, Imyanitov, Evgeny N.

Journal:

Year:

2015

Language:

english

File:

PDF, 515 KB

english, 2015

3

10.1038/45977

Hartl, F. Ulrich, Houry, Walid A., Frishman, Dmitrij, Eckerskorn, Christoph, Lottspeich, Friedrich

Journal:

Year:

1999

Language:

english

File:

PDF, 387 KB

english, 1999

4

Incorporation of non-local interactions in protein secondary structure prediction from the amino acid sequence

Frishman, Dmitrij, Argos, Patrick

Journal:

Protein Engineering Design and Selection

Year:

1996

Language:

english

File:

PDF, 5.71 MB

english, 1996

5

Structural consequences of mutations associated with idiopathic restrictive cardiomyopathy

Tarnovskaya, Svetlana, Kiselev, Artem, Kostareva, Anna, Frishman, Dmitrij

Journal:

Year:

2017

Language:

english

File:

PDF, 1.85 MB

english, 2017

6

Single-read sequence tags of a limited number of genomic DNA fragments provide an inexpensive tool for comparative genome analysis

Hartung, Kristina, Frishman, Dmitrij, Hinnen, Albert, Wölfl, Stefan

Journal:

Year:

1998

Language:

english

File:

PDF, 105 KB

english, 1998

7

Seventy-five percent accuracy in protein secondary structure prediction

Dmitrij Frishman, Patrick Argos

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1997

Language:

english

File:

PDF, 133 KB

english, 1997

8

Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution

Mikhail L Kuravsky, Vladimir V Aleshin, Dmitrij Frishman, Vladimir I Muronetz

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 1.21 MB

english, 2011

9

Will my protein crystallize? A sequence-based predictor

Pawel Smialowski, Thorsten Schmidt, Jürgen Cox, Andreas Kirschner, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 386 KB

english, 2006

10

Defining the fold space of membrane proteins: The CAMPS database

Antonio J. Martin-Galiano, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 502 KB

english, 2006

11

Predicting experimental properties of integral membrane proteins by a naive Bayes approach

Antonio J. Martin-Galiano, Pawel Smialowski, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 218 KB

english, 2008

12

Prediction of helix–helix contacts and interacting helices in polytopic membrane proteins using neural networks

Angelika Fuchs, Andreas Kirschner, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 358 KB

english, 2009

13

Current status of membrane protein structure classification

Sindy Neumann, Angelika Fuchs, Armen Mulkidjanian, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1016 KB

english, 2010

14

Structural comparison and classification of alpha-helical transmembrane domains based on helix interaction patterns

Angelika Fuchs, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 600 KB

english, 2010

15

Camps 2.0: Exploring the sequence and structure space of prokaryotic, eukaryotic, and viral membrane proteins

Sindy Neumann, Holger Hartmann, Antonio J. Martin-Galiano, Angelika Fuchs, Dmitrij Frishman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.77 MB

english, 2012

16

Recognition of distantly related proteins through energy calculations

Ruben Abagyan, Dmitrij Frishman, Patrick Argos

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1994

Language:

english

File:

PDF, 956 KB

english, 1994

17

Cloning and characterization of Enterobacter sakazakii pigment genes and in situ spectroscopic analysis of the pigment

Angelika Lehner, Maya Grimm, Thomas Rattei, Andreas Ruepp, Dmitrij Frishman, Giuseppe G.G. Manzardo, Roger Stephan

Journal:

FEMS Microbiology Letters

Year:

2006

Language:

english

File:

PDF, 119 KB

english, 2006

18

10.1038/35035069

Baumeister, Wolfgang, Ruepp, Andreas, Graml, Werner, Santos-Martinez, Martha-Leticia, Koretke, Kristin K., Volker, Craig, Mewes, H. Werner, Frishman, Dmitrij, Stocker, Susanne, Lupas, Andrei N.

Journal:

Year:

2000

Language:

english

File:

PDF, 218 KB

english, 2000

19

Protein structural classes in five complete genomes

Frishman, Dmitrij, Mewes, H.Werner

Journal:

Natural Structural Biology

Year:

1997

File:

PDF, 442 KB

1997

20

Identification of 42 Possible Cytochrome C Genes in the Shewanella oneidensis Genome and Characterization of Six Soluble Cytochromes

Meyer, Terry E., Tsapin, Alexandre I., Vandenberghe, Isabel, De Smet, Lina, Frishman, Dmitrij, Nealson, Kenneth H., Cusanovich, Michael A., Van Beeumen, Jozef J.

Journal:

Omics A Journal of Integrative Biology

Year:

2004

Language:

english

File:

PDF, 810 KB

english, 2004

21

Conservation of protein–protein interactions – lessons from ascomycota

Philipp Pagel, Hans-Werner Mewes, Dmitrij Frishman

Journal:

Trends in Genetics

Year:

2004

Language:

english

File:

PDF, 191 KB

english, 2004

22

Genome-based structural biology

Dmitrij Frishman, Hans-Werner Mewes

Journal:

Progress in Biophysics and Molecular Biology

Year:

1999

Language:

english

File:

PDF, 830 KB

english, 1999

23

PEDANTic genome analysis

Dmitrij Frishman, Hans-Werner Mewes

Journal:

Trends in Genetics

Year:

1997

Language:

english

File:

PDF, 144 KB

english, 1997

24

The future of protein secondary structure prediction accuracy

Dmitrij Frishman, Patrick Argos

Journal:

Folding and Design

Year:

1997

Language:

english

File:

PDF, 93 KB

english, 1997

25

Iron-regulatory protein-1 (IRP-1) is highly conserved in two invertebrate species : Characterization of IRP-1 homologues in Drosophila melanogaster and Caenorhabditis elegans

Martina Muckenthaler, Niki Gunkel, Dmitrij Frishman, Anna Cyrklaff, Pavel Tomancak, Matthias W. Hentze

Journal:

Year:

1998

Language:

english

File:

PDF, 1.15 MB

english, 1998

26

PROSO II – a new method for protein solubility prediction

Pawel Smialowski, Gero Doose, Phillipp Torkler, Stefanie Kaufmann, Dmitrij Frishman

Journal:

Year:

2012

Language:

english

File:

PDF, 188 KB

english, 2012

27

TargetSpy: a supervised machine learning approach for microRNA target prediction

Martin Sturm, Michael Hackenberg, David Langenberger, Dmitrij Frishman

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.45 MB

english, 2010

28

No statistical support for correlation between the positions of protein interaction sites and alternatively spliced regions

Marc N Offman, Ramil N Nurtdinov, Mikhail S Gelfand, Dmitrij Frishman

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 929 KB

english, 2004

29

PROMPT: a protein mapping and comparison tool

Thorsten Schmidt, Dmitrij Frishman

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 752 KB

english, 2006

30

Applying negative rule mining to improve genome annotation

Irena I Artamonova, Goar Frishman, Dmitrij Frishman

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 319 KB

english, 2007

31

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

Journal:

Year:

2008

Language:

english

File:

PDF, 1.01 MB

english, 2008

32

Conservation of Aconitase Residues Revealed by Multiple Sequence Analysis : Implications for Structure/Function Relationships

Dmitrij Frishman, Matthias W. Hentze

Journal:

Year:

1996

Language:

english

File:

PDF, 503 KB

english, 1996

33

DSBC Protein: A New Member of the Thioredoxin Fold-Containing Family

Dmitrij Frishman

Journal:

Biochemical and Biophysical Research Communications

Year:

1996

Language:

english

File:

PDF, 138 KB

english, 1996

34

Recognition of distantly related protein sequences using conserved motifs and neural networks

Dmitrij Frishman, Patrick Argos

Journal:

Journal of Molecular Biology

Year:

1992

Language:

english

File:

PDF, 3.41 MB

english, 1992

35

Proteome-wide Analysis of Chaperonin-Dependent Protein Folding in Escherichia coli

Michael J. Kerner, Dean J. Naylor, Yasushi Ishihama, Tobias Maier, Hung-Chun Chang, Anna P. Stines, Costa Georgopoulos, Dmitrij Frishman, Manajit Hayer-Hartl, Matthias Mann, F. Ulrich Hartl

Journal:

Year:

2005

Language:

english

File:

PDF, 616 KB

english, 2005

36

Prediction of β-turns and β-turn types by a novel bidirectional Elman-type recurrent neural network with multiple output layers (MOLEBRNN)

Andreas Kirschner, Dmitrij Frishman

Journal:

Year:

2008

Language:

english

File:

PDF, 1.15 MB

english, 2008

37

A Domain Interaction Map Based on Phylogenetic Profiling

Philipp Pagel, Philip Wong, Dmitrij Frishman

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.60 MB

english, 2004

38

Phenylalanine Promotes Interaction of Transmembrane Domains via GxxxG Motifs

Stephanie Unterreitmeier, Angelika Fuchs, Teresa Schäffler, Roland G. Heym, Dmitrij Frishman, Dieter Langosch

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.14 MB

english, 2007

39

Complex Patterns of Histidine, Hydroxylated Amino Acids and the GxxxG Motif Mediate High-affinity Transmembrane Domain Interactions

Jana R. Herrmann, Johanna C. Panitz, Stephanie Unterreitmeier, Angelika Fuchs, Dmitrij Frishman, Dieter Langosch

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 762 KB

english, 2009

40

Ionic Interactions Promote Transmembrane Helix–Helix Association Depending on Sequence Context

Jana R. Herrmann, Angelika Fuchs, Johanna C. Panitz, Thomas Eckert, Stephanie Unterreitmeier, Dmitrij Frishman, Dieter Langosch

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 989 KB

english, 2010

41

Coevolution Predicts Direct Interactions between mtDNA-Encoded and nDNA-Encoded Subunits of Oxidative Phosphorylation Complex I

Moran Gershoni, Angelika Fuchs, Naama Shani, Yearit Fridman, Marisol Corral-Debrinski, Amir Aharoni, Dmitrij Frishman, Dan Mishmar

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 503 KB

english, 2010

42

Starts of bacterial genes: estimating the reliability of computer predictions

Dmitrij Frishman, Andrei Mironov, Mikhail Gelfand

Journal:

Year:

1999

Language:

english

File:

PDF, 334 KB

english, 1999

43

What We Have Learned about Prokaryotes from Structural Genomics

Frishman, Dmitrij

Journal:

Omics A Journal of Integrative Biology

Year:

2003

Language:

english

File:

PDF, 805 KB

english, 2003

44

Assignment of isochores for all completely sequenced vertebrate genomes using a consensus

Thorsten Schmidt, Dmitrij Frishman

Journal:

Year:

2008

Language:

english

File:

PDF, 794 KB

english, 2008

45

Modern Genome Annotation ||

Frishman, Dmitrij, Valencia, Alfonso

Year:

2008

Language:

english

File:

PDF, 8.00 MB

english, 2008

46

Protein Annotation at Genomic Scale: The Current Status

Frishman, Dmitrij

Journal:

Chemical Reviews

Year:

2007

Language:

english

File:

PDF, 539 KB

english, 2007

47

Prediction of protein interaction types based on sequence and network features

Goebels, Florian, Frishman, Dmitrij

Journal:

BMC Systems Biology

Year:

2013

Language:

english

File:

PDF, 1.39 MB

english, 2013

48

Genetic variability within the Polish tomato torrado virus Kra isolate caused by deletions in the 3′-untranslated region of genomic RNA1

Budziszewska, Marta, Wieczorek, Przemysław, Zhang, Yanping, Frishman, Dmitrij, Obrępalska-Stęplowska, Aleksandra

Journal:

Year:

2014

Language:

english

File:

PDF, 4.38 MB

english, 2014

49

Charge-Charge Interactions Promote Transmembrane Helix-Helix Association Depending on Sequence Context

Langosch, Dieter, Herrmann, Jana, Fuchs, Angelika, Panitz, Johanna, Unterreitmeier, Stephanie, Frishman, Dmitrij

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 59 KB

english, 2010

50

How many signal peptides are there in bacteria?

Ivankov, Dmitry N., Payne, Samuel H., Galperin, Michael Y., Bonissone, Stefano, Pevzner, Pavel A., Frishman, Dmitrij

Journal:

Environmental Microbiology

Year:

2013

Language:

english

File:

PDF, 414 KB

english, 2013